Package: denvax 0.1.3

denvax: Simple Dengue Test and Vaccinate Cost Thresholds

Provides the mathematical model described by "Serostatus Testing & Dengue Vaccine Cost-Benefit Thresholds" in <doi:10.1098/rsif.2019.0234>. Using the functions in the package, that analysis can be repeated using sample life histories, either synthesized from local seroprevalence data using other functions in this package (as in the manuscript) or from some other source. The package provides a vignette which walks through the analysis in the publication, a function to generate a project skeleton for such an analysis, and a shiny app to run scenarios.

Authors:Carl A. B. Pearson [aut, cre], Kaja M. Abbas [aut], Samuel Clifford [aut], Stefan Flasche [aut], Thomas J. Hladish [aut]

denvax_0.1.3.tar.gz
denvax_0.1.3.zip(r-4.5)denvax_0.1.3.zip(r-4.4)denvax_0.1.3.zip(r-4.3)
denvax_0.1.3.tgz(r-4.4-any)denvax_0.1.3.tgz(r-4.3-any)
denvax_0.1.3.tar.gz(r-4.5-noble)denvax_0.1.3.tar.gz(r-4.4-noble)
denvax_0.1.3.tgz(r-4.4-emscripten)denvax_0.1.3.tgz(r-4.3-emscripten)
denvax.pdf |denvax.html
denvax/json (API)

# Install 'denvax' in R:
install.packages('denvax', repos = c('https://pearsonca.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://gitlab.com/cabp_lshtm/denvax

Datasets:

On CRAN:

3.70 score 1 scripts 196 downloads 1 mentions 17 exports 0 dependencies

Last updated 5 years agofrom:02a18792ab. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 06 2024
R-4.5-winNOTENov 06 2024
R-4.5-linuxNOTENov 06 2024
R-4.4-winNOTENov 06 2024
R-4.4-macNOTENov 06 2024
R-4.3-winNOTENov 06 2024
R-4.3-macNOTENov 06 2024

Exports:build.projectdenvaxAppnPxArescale_x_Tcostrescale_y_VcostROIROIcoeffsscale_color_ROIsignscale_fill_ROIscale_linetype_ROIlvlscale_x_log10tauscale_x_startAgescale_y_endAgescale_y_nuscale_y_numTestsserofitsynthetic.pop

Dependencies:

Published Test-then-Vaccinate ROI Analyses

Rendered frompublished-analysis.Rmdusingknitr::rmarkdownon Nov 06 2024.

Last update: 2019-08-21
Started: 2019-05-05